I dunno, I think what you had before looked better.
One thing you could do in the intro that would make nitpickers like me very happy, is set the planet models to not cast shadows on the ship.
I know it happens in the original intro, but that's just as much a gaff as the lower saucer bumps being applied to the upper saucer.
The shadow of a planet at that distance is simply nowhere near defined enough to pass over a ship like that. Things like that, and one of the shots of all the basestars over Caprica in The Plan (some of the basestars are partially behind the limb of the planet), really bug me. It's lack of respect for the true scale of planets.
Anyway, that's my little bit of OCD input. VERY nice work on everything else, though.