In my opinion, the whole trait/skill system is inherently flawed to begin with. And as is plainly noticable, is becoming more flawed with Season 9.
I think they should just scrap the traits (racial, reputation, career etc) as well as the Skill Point system, and build a robust "Talent Tree" type system. Perhaps even extend Talent Tree's into "Ships", where every ship would have the same "basic" talents to choose from, as well as some that are specific to the ship "career" path, such as Escorts, Cruisers or Science vessels. These talents would then be done to either boost damage, survival, support, or a combination therein.